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University of Groningen Sec translocase in action Komarudin, Amalina Ghaisani

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Sec translocase in action

Komarudin, Amalina Ghaisani

IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from

it. Please check the document version below.

Document Version

Publisher's PDF, also known as Version of record

Publication date:

2019

Link to publication in University of Groningen/UMCG research database

Citation for published version (APA):

Komarudin, A. G. (2019). Sec translocase in action: Translocation initiation and processivity. University of

Groningen.

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Sec translocase in action

Translocation initiation and processivity

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ISBN: 978-94-034-1773-8 (Printed version) ISBN: 978-94-034-1772-1 (Electronic version)

The research presented in this thesis was performed in the research group of Molecular Microbiology of the Groningen Biomolecular Science and Biotechnology, University of Groningen, UIF/FUIFSMBOETBOEXBTmOBODJBMMZTVQQPSUFECZUIFJODFOUJWFTDIFNFPGUIF;FSOJLF*OTUJUVUFGPS Advanced Materials and by the Foundation of Life Sciences of the Netherlands Organization for 4DJFOUJmD3FTFBSDI "-8/80

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1SJOUJOH*QTLBNQQSJOUJOH XXXQSPFGTDISJGUFOOFU

© 2019, Amalina Ghaisani Komarudin

"MMSJHIUTSFTFSWFE/PQBSUPGUIJTUIFTJTNBZCFSFQSPEVDFE TUPSFE PSUSBOTNJUUFEJOBOZGPSN or by any means without the prior permission of the copyright holder, or when applicable, of the QVCMJTIFSTPGUIFTDJFOUJmDQBQFST

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Sec translocase in action

Translocation initiation and processivity

PhD thesis

to obtain the degree of PhD at the University of Groningen

on the authority of the 5HFWRU0DJQL¿FXVSURI(6WHUNHQ

and in accordance with WKHGHFLVLRQE\WKH&ROOHJHRI'HDQV This thesis will be defended in public on

7XHVGD\-XO\DWKRXUV

by

Amalina Ghaisani Komarudin

born on 24 February 1990 in Bandung, Indonesia

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TABLE OF CONTENTS

Chapter 1

SecA Mediated Protein Translocation Through SecYEG Channel 10

Chapter 2

Engineering of the Two-helix Finger of SecA ATPase 40

Chapter 3

4FD:&(.FEJBUFT5SBOTMPDBUJPOPG4FDSFUPSZ1SPUFJO.PEJmFEXJUI/PO1PMZQFQUJEF Segments

54

Chapter 4

Dynamics of the Interaction between the Two-helix Finger of SecA ATPase and SecYEG 74 Chapter 5 Summary 94 Samenvatting 101 3JOHLBTBO 107 Appendices "DLOPXMFEHFNFOUT 116

About the Author 121

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If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim.. Downloaded

The research presented in this thesis was carried out in the group of Molecular Genetics of the Groningen Biomolecular Sciences and Biotechnology Institute (GBB), Faculty of