University of Groningen
Deacetylase inhibitors & Histone inheritance
Zwinderman, Martijn R. H.
DOI:
10.33612/diss.167867692
IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from
it. Please check the document version below.
Document Version
Publisher's PDF, also known as Version of record
Publication date:
2021
Link to publication in University of Groningen/UMCG research database
Citation for published version (APA):
Zwinderman, M. R. H. (2021). Deacetylase inhibitors & Histone inheritance. University of Groningen.
https://doi.org/10.33612/diss.167867692
Copyright
Other than for strictly personal use, it is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), unless the work is under an open content license (like Creative Commons).
Take-down policy
If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim.
Downloaded from the University of Groningen/UMCG research database (Pure): http://www.rug.nl/research/portal. For technical reasons the number of authors shown on this cover page is limited to 10 maximum.
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
Processed on: 16-3-2021 Processed on: 16-3-2021 Processed on: 16-3-2021Processed on: 16-3-2021 PDF page: 1PDF page: 1PDF page: 1PDF page: 1
Deacetylase inhibitors
&
Histone inheritance
PhD thesis
to obtain the degree of PhD at the
University of Groningen
on the authority of the
Rector Magnificus Prof. C. Wijmenga
and in accordance with
the decision by the College of Deans.
This thesis will be defended in public on
Friday 9 April 2021 at 16.15 hours
by
Reint Harm Zwinderman
born on 17 November 1990
in Winschoten, The Netherlands
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
Processed on: 16-3-2021 Processed on: 16-3-2021 Processed on: 16-3-2021Processed on: 16-3-2021 PDF page: 2PDF page: 2PDF page: 2PDF page: 2
Supervisors
Prof. F. J. Dekker Prof. H. J. HaismaAssessment committee
Prof. R. Gosens Prof. C. Ottmann Prof. J. J. SchuringaThe work described in this thesis was carried out at the Groningen Research Institute of Pharmacy, University of Groningen, The Netherlands.
Cover by Martijn Zwinderman featuring James Watson and Francis Crick. Printed by Gildeprint, Enschede, The Netherlands.
© 2021, Martijn Zwinderman.
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
Processed on: 16-3-2021 Processed on: 16-3-2021 Processed on: 16-3-2021Processed on: 16-3-2021 PDF page: 3PDF page: 3PDF page: 3PDF page: 3
“Ik heb het nog nooit gedaan, dus ik denk dat ik het wel kan.”
Pippi Langkous
“I have never tried that before, so I think I should definitely be able to do
that.”
Pippi Longstocking
2
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
Processed on: 16-3-2021 Processed on: 16-3-2021 Processed on: 16-3-2021Processed on: 16-3-2021 PDF page: 4PDF page: 4PDF page: 4PDF page: 4
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
Processed on: 16-3-2021 Processed on: 16-3-2021 Processed on: 16-3-2021Processed on: 16-3-2021 PDF page: 5PDF page: 5PDF page: 5PDF page: 5
Contents
Chapter 1
Introduction
6
Deacetylase inhibitors
Chapter 2
Acetylation and methylation in asthma, COPD, and lung
cancer
18
Chapter 3
Targeting HDAC complexes in asthma and COPD
58
Chapter 4
Effect of Class I selective HDAC inhibitors with an
o-aminobenzamide substituted thiophene scaffold on
inflammatory gene expression in macrophages
82
Histone inheritance
Chapter 5
Bioorthogonal metabolic labeling
132
Chapter 6
Inversion of asymmetric histone deposition upon
replication stress
148
Chapter 7
Summary and future perspectives
190
Appendices
Nederlandse samenvatting
Publications
Posters
Acknowledgements
Curriculum Vitae
198
201
204
206
210
4
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
556559-L-bw-Zwinderman-FLIPBOOK
Processed on: 16-3-2021 Processed on: 16-3-2021 Processed on: 16-3-2021Processed on: 16-3-2021 PDF page: 6PDF page: 6PDF page: 6PDF page: 6