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University of Groningen Genetic engineering of Penicillium chrysogenum for the reactivation of biosynthetic pathways with potential pharmaceutical value Guzmán Chávez, Fernando

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University of Groningen

Genetic engineering of Penicillium chrysogenum for the reactivation of biosynthetic pathways

with potential pharmaceutical value

Guzmán Chávez, Fernando

IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from

it. Please check the document version below.

Document Version

Publisher's PDF, also known as Version of record

Publication date:

2018

Link to publication in University of Groningen/UMCG research database

Citation for published version (APA):

Guzmán Chávez, F. (2018). Genetic engineering of Penicillium chrysogenum for the reactivation of

biosynthetic pathways with potential pharmaceutical value. University of Groningen.

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Genetic engineering

of Penicillium chrysogenum

for the reactivation of biosynthetic pathways

with potential pharmaceutical value

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The work described in this thesis was carried out in the Department of Molec-ular Microbiology of the Groningen BiomolecMolec-ular Sciences and Biotechnology Institute (GBB), University of Groningen (RuG), The Netherlands. It was finan-cially supported by a doctoral grant to FGC (218106/313680) from Consejo Nacional de Ciencia y Tecnologıa (CONACyT, Mexico), Becas Complemento SEP (Mexico) and housing subsidy by University of Groningen.

ISBN: 978-94-034-0296-3

ISBN: 978-94-034-0295-6 (electronic version)

Printing of this thesis was supported by generous contribution from the Uni-versity of Groningen and the Groningen Biomolecular Sciences and Biotech-nology Institute (GBB).

Cover design, layout and printing: Lovebird design.

www.lovebird-design.com

Copyright © 2018 by Fernando Guzmán Chávez. All rights reserved. No part of this book may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, without prior permission of the author.

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Genetic engineering of Penicillium

chrysogenum for the reactivation of

biosynthetic pathways with potential

pharmaceutical value

PhD thesis

to obtain the degree of PhD at the

University of Groningen

on the authority of the

Rector Magnificus Prof. E. Sterken

and in accordance with

the decision by the College of Deans.

This thesis will be defended in public on

Friday 26 January 2018 at 12.45 hours

by

Fernando Guzmán Chávez

born on 27 May 1985

in Mexico City, Mexico

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Supervisors

Prof. A.J.M. Driessen

Prof. R.A.L. Bovenberg

Assessment Committee

Prof. L. Dijkhuizen

Prof. O.P. Kuipers

Prof. H.A.B. Wosten

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CONTENTS

CHAPTER 1 INTRODUCTION

FUNCTIONAL ANALYSIS OF POLYKETIDE GENE CLUSTERS IN PENICILLIUM CHRYSOGENUM

7

CHAPTER 2 IDENTIFICATION OF A POLYKETIDE SYNTHASE INVOLVED IN SORBICILLIN BIOSYNTHESIS BY

PENICILLIUM CHRYSOGENUM

59

CHAPTER 3 MECHANISM AND REGULATION OF SORBICILLIN BIOSYNTHESIS BY PENICILLIUM CHRYSOGENUM

87

CHAPTER 4 DEREGULATION OF SECONDARY METABOLISM IN A HISTONE DEACETYLASE MUTANT OF PENICILLIUM CHRYSOGENUM

115

CHAPTER 5 GENE INACTIVATION AND OVEREXPRESSION OF PUTATIVE β-LACTAM PRODUCTION RELATED TRANSPORTERS IN PENICILLIUM CHRYSOGENUM

155

CHAPTER 6 SUMMARY

NEDERLANDSE SAMENVATTING

RESUMEN EN ESPAÑOL MEXICANIZADO

175 183 191 ADDENDUM ACKNOWLEDGEMENTS LIST OF PUBLICATIONS SHORT BIOGRAPHY 199 204 205

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