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University of Groningen Engineering amidases for peptide C-terminal modification Arif, Muhammad Irfan

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University of Groningen

Engineering amidases for peptide C-terminal modification Arif, Muhammad Irfan

IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below.

Document Version

Publisher's PDF, also known as Version of record

Publication date: 2018

Link to publication in University of Groningen/UMCG research database

Citation for published version (APA):

Arif, M. I. (2018). Engineering amidases for peptide C-terminal modification. University of Groningen.

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@ Muhammad Irfan Arif, Groningen,the Netherlands, 2018

ISBN (printed version):978-94-034-0948-1

ISBN (electronic version):978-94-034-0949-8

Graphicdesign and layout by the author.

The research done in this thesis was carried out at the Groningen Biomolecular Sciences and Biotechnology Institute (GBB) in the Biochemical Laboratory of the University of Groningen according to the requirements of the Graduate School of Science (Faculty of Mathematics and Natural Sciences, University of Groningen) and was supported by Netherlands Organization for Scientific Research (NWO). This project is part of the Integration of Biosynthesis and Organic Synthesis program (IBOS-2; project 053.63.014) funded by the Advanced Chemical Technologies for Sustainability (ACTS) and NWO.

Back Cover:River Chenabcrossingthrough Gujrat, Pakistan, photographed by the author.

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Engineering amidases for peptide

C-terminal modification

PhD thesis

to obtain the degree of PhD at the University of Groningen

on the authority of the Rector Magnificus Prof. E. Sterken

and in accordance with

the decision by the College of Deans. This thesis will be defended in public on

Monday 8 October at 11:00 hours

by

Muhammad Irfan Arif

born on 19 March 1982 in Gujrat, Pakistan

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Supervisor

Prof. D.B. Janssen

Assessment Committee

Prof. A.J.M. Driessen Prof. J. Kok

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TABLE OF CONTENTS

Chapter 1 General Introduction: enzymatic synthesis of bioactive peptides 7

Chapter 2 Identification and characterization of a novel peptide amidase

from Glycin max (soybean)

89

Chapter 3 One-step C-terminal deprotection and activation of peptides with

peptide amidase from Stenotrophomonas maltophilia in neat organic solvent

113

Chapter 4 Peptide C-terminal modification using a computationally

stabilized peptide amidase

127

Chapter 5 Peptide esterification by SbPam: studies on organic solvent

stability and thermostability

153

Chapter 6 Summary and Outlook 175

Nederlandse samenvating 185

Acknowledgements 191

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