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University of Groningen The role of microbe-matrix interactions in dairy starter culture functionality Tarazanova, Mariya

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University of Groningen

The role of microbe-matrix interactions in dairy starter culture functionality

Tarazanova, Mariya

IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below.

Document Version

Publisher's PDF, also known as Version of record

Publication date: 2018

Link to publication in University of Groningen/UMCG research database

Citation for published version (APA):

Tarazanova, M. (2018). The role of microbe-matrix interactions in dairy starter culture functionality. University of Groningen.

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Downloaded from the University of Groningen/UMCG research database (Pure): http://www.rug.nl/research/portal. For technical reasons the number of authors shown on this cover page is limited to 10 maximum.

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The role of Microbe-Matrix interactions

in dairy starter culture functionality

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The research described in this thesis was conducted at NIZO BV (Ede, The Netherlands) and was embedded within the Molecular Genetics Group of the Faculty Mathematics and Natural Sciences, University of Groningen (Groningen, The Netherlands).

The research presented in this thesis was performed within the framework of TI Food and Nutrition (TiFN, Wageningen, The Netherlands), a public-private partnership on pre-competitive research in food and nutrition.

Industrial partners:

Printing of this thesis was financially supported by the Graduate School of Science (University of Groningen) and TiFN.

Cover Design: Milo van der Schuur, Ben Jansen, Mariya Tarazanova

The cover shows the 3D milk matrix fermented with Lactococcus lactis B40. The image was taken by Jan Klok/M.Tarazanova with confocal laser scanning microscopy (zoom 4, 13 μm deep into the sample) by merging 3 pictures of z-scan. The Argon laser was used to visualize the Syto 9-stained bacteria, while the DPSS 561 laser was used to visualize the milk protein and fat droplet in the matrix that were stained by the Acridine Orange and Rhodamine B, respectively. The objective lens used was an HCX PL APO 63×/1.2 /water CORR CS. Bacterial cells are green, proteins and lipids appear orange/red; the black areas represent the serum fraction. For other examples of fermented milk microstructure please see Chapter 4.

Layout: Ben Jansen & Mariya Tarazanova

Printed by: Ipskamp Drukkers B.V., Enschede, The Netherlands

ISBN (print): 978-94-034-0870-5

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The role of Microbe-Matrix

interactions in dairy starter culture

functionality

PhD thesis

to obtain the degree of PhD at the

University of Groningen

on the authority of the

Rector Magnificus Prof. E. Sterken

and in accordance with

the decision by the College of Deans.

This thesis will be defended in public on

Friday 12 October 2018 at 12.45 hours

by

Mariya Tarazanova

born on 25 February 1988

in Moscow, Russia

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Supervisor Prof. J. Kok Co-supervisor Dr. H. Bachmann Assessment Committee Prof. L. Dijkhuizen Prof. E.J. Smid Prof. E. Tsakalido

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Contents

CHAPTER 1 ... 1

GENERAL INTRODUCTION... 1

CHAPTER 2 ... 53

PLASMID COMPLEMENT OF LACTOCOCCUS LACTISNCDO712 REVEALS A NOVEL PILUS GENE CLUSTER ... 53

CHAPTER 3 ... 95

CELL SURFACE PROPERTIES OF LACTOCOCCUS LACTIS REVEAL MILK PROTEIN BINDING SPECIFICALLY EVOLVED IN DAIRY ISOLATES ... 95

CHAPTER 4 ... 139

ALTERING TEXTURAL PROPERTIES OF FERMENTED MILK BY USING SURFACE -ENGINEERED LACTOCOCCUS LACTIS ... 139

CHAPTER 5 ... 165

INFLUENCE OF LACTOCOCCAL SURFACE PROPERTIES ON CELL RETENTION AND DISTRIBUTION IN CHEESE CURD ... 165

CHAPTER 6 ... 183

BACTERIAL EMULSIFICATION BY AND TRANSCRIPTIONAL RESPONSE OF LACTOCOCCUS LACTIS RESIDING AT AN OIL-WATER INTERPHASE ... 183

CHAPTER 7 ... 209 GENERAL DISCUSSION ... 209 ADDENDA ... 221 Samenvatting ... 222 Summary ... 225 Резюме ... 228 Acknowledgements ... 232

About the author ... 234

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