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Novel thyroid specific transcripts identified by SAGE: implication for congenital hypothyroidism - Abbreviations

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UvA-DARE (Digital Academic Repository)

Novel thyroid specific transcripts identified by SAGE: implication for congenital

hypothyroidism

Moreno Navarro, J.C.

Publication date

2003

Link to publication

Citation for published version (APA):

Moreno Navarro, J. C. (2003). Novel thyroid specific transcripts identified by SAGE:

implication for congenital hypothyroidism.

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Abbrev:atinns s

Abbreviations s

aaa amino acid(s)

ACTHH adrenocorticotropic hormone AHOO Albright's hereditary osteodystrophy ASGPRR asialoglycoprotein receptor

bpp base pair(s): kilo base pairs indicated as kb cAMPP cyclic adenosine monophosphate

cDNAA complementary DNA cRNAA complementary RNA (cDNA) CHH congenital hypothyroidism CHOO chinese hamster ovary cells

CPHDD combined pituitary hormone deficiencies CNSS central nervous system

Daa Dalton

DABB diaminobenzidme DEHAL11 dehalogenase 1 gene

DITT dnodotyrosine

D I 0 11 iodothyronine deiodmase gene type 1 D I 0 22 iodothyronine deiodinase gene type 2 D I 0 33 iodothyronine deiodinase gene type 3 DNAA deoxyribonucleic acid

ERR endoplasmic reticulum ESTT expressed sequence tag FSHH follicle-stimulating hormone FT33 free T3

FT44 free T4

FKHL155 forkhead-like gene 15 (acronym for FOXE1/ TTF2) FMNN flavin mononucleotide

GHH growth hormone

GNAS11 guanine nucleotide binding alpha-subunit 1 gene H2022 hydrogen peroxide

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HesX1 1 HRP P hTG G hTORI I [[ r Km Km LH H LHX3 3 L O M W I O M M MBq q M!T T m R N A A MSH H N a C I 0 4 4 NIS S Nkx2.1 1 NM M NR R nt t ORF F PAX8 8 PCR R PDGF F PDS S PDi i PHPP 1a PIOD D Pit-1 1 PKA A PKC C P O U 1 F 1 1

homeoboxx gene expressed in ES cells (transcription facton horseradishh peroxidase

humann TG

aa human thyroid ce ' line iodinee / iodide

Michaeliss Menten constant luteinizingg hormone

LIMM homeobox 3 (transcription factor) loww molecular weight lodinated material megaa Becquerel

monoiodotyrosme e messengerr RNA

melanocyte-stimuiatingg hormone sodiumm perchlorate

sodiumm iodide symporter

acronymm for TTF1 (thyroid transcription factor 1) no-matchh (tag)

nitroreductase e nucleotide(s) ) openn reading frame

pairedd box gene 8 (transcription factor) polymerasee chain reaction

platelet-derivedd growth factor Pendredd syndrome

proteinn disulfide isomerase

pseudohypoparathyroidismm type 1a partiall iodide organification defect mousee homologue of human POU1F1 proteinn kinase A

proteinn kinase C

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Abbreviations s PRL L PROP1 1 RACE E RFLP P RIA A RNA A rT3 3 RTH H RT-PCR R SAGE E SD D SDSS PAGE SP P SSCP P T3 3 T3-R R T4 4 TBG G Tg,, TG TGF-B B TSD D THOX2,, THOX1 THR R TIOD D TPE E TPO O TR R T R H / T R H - R R TSHH / T S H - R T T F 1 / T T F 2 2 UIE E UTR R prolactin n

prophett of Rit-1 (POU1F1). paired like homeodomam transcription rapidd amplification of complementary DNA ends

restrictionn fragment length polymorphism radioimmunoassay y

ribonucleicc acid

3,33 ^'-triiodothyronine or reverse T3 resistancee to thyroid hormone reversee transcriptase PCR seriall analysis of gene expression standardd deviation

sodiumm dodecyl sulphate polyacrylamide gel electrophoresis signall peptide or leader sequence

singlee strand conformation polymorphism

3,5.3'-tniodothyroninee or bio-active thyroid hormone T33 receptor

thyroxinee or prohormone of thyroid hormone thyroxine-bindingg globulin

thyroglobulin,, thyroglobulin gene transformingg growth factor beta Tgg synthesis defect

thyroidd oxidase 2 gene, thyroid oxidase 1 gene thyroidd hormone receptor gene (A and B) totall iodide organification defect

tissuee preferential expression thyroidd peroxidase

thyroidd hormone receptor, nuclear protein thyrotropin-releasingg hormone / TRH-receptor

thyroidd stimulating hormone or thyrotropin / TSH-receptor thyroidd transcription factor 1 / thyroid transcription factor 2 urinaryy iodine excretion

untranslatedd region

factor r

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