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University of Groningen

Supercharged proteins and polypeptides for advanced materials in chemistry and biology

Ma, Chao

IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below.

Document Version

Publisher's PDF, also known as Version of record

Publication date: 2019

Link to publication in University of Groningen/UMCG research database

Citation for published version (APA):

Ma, C. (2019). Supercharged proteins and polypeptides for advanced materials in chemistry and biology. University of Groningen.

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Supercharged Proteins and Polypeptides for

Advanced Materials in Chemistry and Biology

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The work described in this thesis was performed in the Polymer Chemistry and

Bioengineering group of the Zernike Institute for Advanced Materials at the University

of Groningen, the Netherlands.

This work was supported financially by the Chinese Scholarship Council.

Cover design by: Guolong (Sedah) Mo and Chuyao Geng

Printed by IPSKAMP printing

Zernike Institute PhD thesis series 2019-19

ISSN 1570-1530

ISBN: 978-94-034-1789-9 (printed version)

ISBN: 978-94-034-1788-2 (electronic version)

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Supercharged Proteins and

Polypeptides for Advanced

Materials in Chemistry and Biology

Phd thesis

to obtain the degree of PhD at the

University of Groningen

on the authority of the

Rector Magnificus prof. E. Sterken

and in accordance with

the decision by the College of Deans.

This thesis will be defended in public on

Friday 28 June 2019 at 11.00 hours

by

Chao Ma

born on 5 December 1988

in Shanxi, China

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Supervisor

Prof. A. Herrmann

Co-supervisor

Prof. P. van Rijn

Assessment Committee

Prof. D. J. Slotboom

Prof. H. Boerner

Prof. U. Schwaneberg

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Table of Contents

CHAPTER 1. INTRODUCTION

1.Introduction Of Supercharged Proteins ... 3

2.Supercharged Proteins In Nature ... 4

3.Engineering Supercharged Folded Proteins ... 13

4.Supercharging By Conjugation to A Natural Disordered Polypeptide ... 20

5.Engineering Supercharged Unstructured Polypeptides ... 23

6.Conclusions and Outlook... 36

7.Motivation and Thesis Outline ... 38

8.Reference ... 40

CHAPTER 2. TUNING ICE NUCLEATION WITH SUPERCHARGED POLYPEPTIDES 1.Introduction ... 51

2.Results and Discussion ... 52

3.Conclusion ... 60

4.Experimental Part and Supplementary Data ... 61

5.References ... 79

CHAPTER 3. A HYPOTHESIS-FREE SENSOR ARRAY DISCRIMINATES WHISKIES FOR BRAND, AGE, AND TASTE 1.Introduction ... 83

2.Results and Discussion ... 84

3.Conclusion ... 91

4.Experimental Part and Supplementary Data ... 91

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CHAPTER 4. SELF-ASSEMBLY OF ELECTROSTATIC COCRYSTALS FROM SUPERCHARGED FUSION PEPTIDES AND PROTEIN CAGES

1.Introduction...115

2.Resultsand Discussion...116

3.Conclusion...122

4.Experimental Partand Supplementary Data...122

5.References...134

CHAPTER5.DE NOVO DESIGN OF A FREE-STANDING, SUPERCHARGED POLYPEPTIDE, PROTON CONDUCTING MEMBRANE 1.Introduction...141

2.Resultsand Discussion...142

3.Conclusion...150 4.Supplementary Data...151 5.References...167 SUMMARY...171 SAMENVATTING...175 PUBLICATION LIST...178 ACKNOWLEDGEMENTS...180

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