University of Groningen
Advancing transcriptome analysis in models of disease and ageing
de Jong, Tristan Vincent
DOI:
10.33612/diss.99203371
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Publication date:
2019
Link to publication in University of Groningen/UMCG research database
Citation for published version (APA):
de Jong, T. V. (2019). Advancing transcriptome analysis in models of disease and ageing. Rijksuniversiteit
Groningen. https://doi.org/10.33612/diss.99203371
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Chapter 10
List of publications
270
Arango Isaza, R. E., Diaz-Trujillo, C., Dhillon, B., Aerts, A., Carlier, J., Crane, C. F., … Kema, G. H. J. (2016). Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control. PLOS Genetics, 12(8), e1005876.
https://doi.org/10.1371/journal.pgen.1005876
Bakker, B., Taudt, A., Belderbos, M. E., Porubsky, D., J Spierings, D. C., de Jong, T. V., … Foijer, F. (2016). Single-cell sequencing reveals karyotype heterogeneity in murine and human malignancies. Genome Biology volume 17, Article number: 115 (2016)
https://doi.org/10.1186/s13059-016-0971-7
Hernandez-Segura, A., de Jong, T. V., Melov, S., Guryev, V., Campisi, J., & Demaria, M. (2017).
Unmasking Transcriptional Heterogeneity in Senescent Cells. Current Biology, 27(17), 2652–2660.e4. https://doi.org/10.1016/J.CUB.2017.07.033
Sin, O., de Jong, T., Mata-Cabana, A., Kudron, M., Zaini, M. A., Aprile, F. A., … Nollen, E. A. A. (2017). Identification of an RNA Polymerase III Regulator Linked to Disease-Associated Protein Aggregation.
Molecular Cell, 65(6), 1096–1108.e6. https://doi.org/10.1016/j.molcel.2017.02.022
De Vries, M., Faiz, A., Woldhuis, R. R., Postma, D. S., De Jong, T. V., Sin, D. D., … Brandsma, C. A. (2018). Lung tissue gene-expression signature for the ageing lung in COPD.
Thorax, 73(7), 609–617.
https://doi.org/10.1136/thoraxjnl-2017-210074
Ovchinnikova, E., Hoes, M., Ustyantsev, K., Bomer, N., de Jong, T. V., van der Mei, H., … van der Meer, P. (2018).
Modeling Human Cardiac Hypertrophy in Stem Cell-Derived Cardiomyocytes. Stem Cell Reports, 10(3), 794–807.
Chapter 10
271
Zaini, M. A., Müller, C., de Jong, T. V., Ackermann, T., Hartleben, G., Kortman, G., … Calkhoven, C. F. (2018).
A p300 and SIRT1 Regulated Acetylation Switch of C/EBPα Controls Mitochondrial Function. Cell Reports, 22(2), 497–511.
https://doi.org/10.1016/j.celrep.2017.12.061
Müller, C., Zidek, L. M., Ackermann, T., de Jong, T., Liu, P., Kliche, V., … Calkhoven, C. F. (2018). Reduced expression of C/EBPβ-LIP extends health and lifespan in mice.
eLife 2018;7:e34985
https://doi.org/10.7554/eLife.34985
De jong, T.V., Moshkin Y., Guryev. V. (2019).
Gene expression variability – the other dimension in transcriptome analysis. Physiological genomics 2019 May 1;51(5):145-158.
https://doi.org/10.1152/physiolgenomics.00128.2018
Ng-Blichfeldt J.P., de Jong T.V., Kortekaas R.K., Wu1 X., Lindner M., Guryev V., Hiemstra P.S., Stolk J., Königshoff M., Gosens R. (2019)
TGF-β activation impairs fibroblast ability to support adult lung epithelial progenitor cell organoid formation.
American Journal of Physiology Lung, 2019 Jul 1;317(1):L14-L28. https://doi.org/10.1152/ajplung.00400.2018
