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Stepping into the RING: preclinical models in the fight against hereditary breast cancer - Abbreviations

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Stepping into the RING: preclinical models in the fight against hereditary breast

cancer

Drost, R.M.

Publication date

2012

Link to publication

Citation for published version (APA):

Drost, R. M. (2012). Stepping into the RING: preclinical models in the fight against hereditary

breast cancer. Het Nederlands Kanker Instituut - Antoni van Leeuwenhoek Ziekenhuis.

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Abbreviations

5-FU 5-fluorouracil

aa amino acids

ABC ATP-binding cassette

aCGH array comparative genomic hybridization ATM ataxia-telangiectasia mutated

BAC bacterial artificial chromosome

BACH1 BRCA1-interacting protein C-terminal helicase 1 BARD1 BRCA1-associated RING domain protein 1 BER base excision repair

BIC breast cancer information core

BLG beta-lactoglobin

BrdU bromodeoxyuridine

CK cytokeratin

CNA copy number aberration

COBRA-FISH combined binary ratio labelling-fluorescence in situ hybridization

CtIP CtBP-interacting protein 1

DDR DNA damage response

DOPPCR degenerate-oligonucleotide priming polymerase chain reaction DSB double-strand break DZNep 3-deanzaneplanocin A E embryonic day ER estrogen receptor ES embryonic stem FA fanconi anaemia

FA-N fanconi anaemia subtype N FA-D1 fanconi anaemia subtype D1

GEMM genetically engineered mouse model H3-K27me3 histone H3 lysine 27 trimethylation HBOC hereditary breast and ovarian cancer

HER2 human epidermal growth factor receptor type 2

HR homologous recombination

HRD homologous recombination deficiency

HU hydroxyurea

ICL interstrand crosslink IDC invasive ductal carcinoma

IR ionizing radiation

IRIFs irradiation-induced foci KB1(185stop)P K14cre;Brca1F/185stop;p53F/F

KB1(5382stop)P K14cre;Brca1F/5382stop;p53F/F

KB1C61GP K14cre;Brca1F/C61G;p53F/F

KB1P K14cre;Brca1F/F;p53F/F

KB2P K14cre;Brca2F/F;p53F/F

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LIF leukaemia inhibitory factor LOH loss of heterozygosity mESCs mouse embryonic stem cells

MMC mitomycin C

MMR mismatch repair

MMS methylmethane sulphonate MMTV mouse mammary tumor virus MTD maximum tolerable dose NER nucleotide excision repair NES nuclear export sequence NLS nuclear localization signal NMD nonsense-mediated mRNA decay

OS overall survival

PALB2 partner and localizer of BRCA2 PARP poly(ADP-ribose) polymerase-1 PDX patient-derived xenograft PI3K phospho-inositol-3 kinase

PR progesterone receptor

PRC2 polycomb repressive complex 2

RMCE recombinase-mediated cassette exchange

SCD SQ/TQ cluster domain

SCE sister chromatid exchange

SCM stem cell medium

shRNA short hairpin RNA SKY spectral karyotyping

SNP small nucleotide polymorphism

SRB sulforhodamine B

SSB single-strand break

ssDNA single-stranded DNA

TFS tumor-free survival

TNBC triple negative breast cancer

TSA trichostatin A

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