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The handle

http://hdl.handle.net/1887/138402

holds various files of this Leiden

University dissertation.

Author: Huberty, M.D.

Title: From the root of variation: A metabolomics perspective to plant soil-feedback

Issue date: 2020-11-24

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From the root of variation –

A metabolomics perspective to

plant soil-feedback

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Copyright © 2020, Martine Deborah Huberty

From the root of variation - A metabolomics perspective to plant soil-feedback

The research described in this thesis was carried out in the department of Terrestrial Ecology at the Netherlands Institute of Ecology (NIOO-KNAW) and the Institute of Biology of Leiden University, The Netherlands and funded by NWO VICI grant 865.14.006

Design of the cover: Julika Hother Printed by Printsupport4u, Steenwijk ISBN

978-94-92597-55-7

This dissertation, or parts of, may be reproduced freely for scientific and educational purposes as long as the source of the material is acknowledged

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From the root of variation - A metabolomics perspective to plant soil-feedback Proefschrift

ter verkrijging van

de graad van Doctor aan de Universiteit Leiden, op gezag van Rector Magnificus prof.mr. C.J.J.M. Stolker,

volgens besluit van het College voor Promoties te verdedigen op dinsdag 24 November 2020

klokke 15:00 uur

door

Martine Deborah Huberty geboren te Ettelbrück, Luxembourg

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Promotiecommissie

Promotor: Prof. Dr. ir. T. M. Bezemer

Leiden University Co-promotor: Dr. Y.H. Choi

Leiden University

Promotiecommissie: Prof. Dr. G.P. van Wezel (voorzitter)

Leiden University

Prof. Dr. R. Offringa (secretaris)

Leiden University Prof. Dr. J. Memelink Leiden University Prof. Dr. J.M. Raaijmakers Leiden University Prof. Dr. P. Garbeva University of Copenhagen

Netherlands Institute of Ecology (NIOO-KNAW)

Dr. S. Rudaz

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Contents

Chapter 1: General introduction ... 11

Chapter 2: Aboveground plant metabolomic responses to plant-soil feedbacks and herbivory ... 27

Chapter 3: Soil inoculation alters leaf metabolic profiles in genetically identical plants ... 61

Chapter 4: Temporal dynamics of soil feedbacks on soil microbiomes, leaf metabolomics and plant-insect interactions ... 91

Chapter 5: Herbivory effects on the metabolome of Taraxacum officinale monitored in multi analytical platforms and their quality comparison ... 139

Chapter 6: General discussion ... 169

References ... 185 Summary ... 199 Samenvatting ... 203 Zesummefaassung ... 207 Acknowledgments ... 211 Curriculum vitae ... 215 Publications ... 216

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