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Newts in time and space: the evolutionary history of Triturus newts at different temporal and spatial scales

Espregueria Themudo, G.

Citation

Espregueria Themudo, G. (2010, March 10). Newts in time and space: the evolutionary history of Triturus newts at different temporal and spatial scales. Retrieved from

https://hdl.handle.net/1887/15062

Version: Corrected Publisher’s Version

License: Licence agreement concerning inclusion of doctoral thesis in the Institutional Repository of the University of Leiden

Downloaded from: https://hdl.handle.net/1887/15062

Note: To cite this publication please use the final published version (if applicable).

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Newts in time and space:

The evolutionary history of Triturus newts at different temporal and spatial scales

Gonçalo Espregueira Themudo

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Espregueira Themudo, Gonçalo

Newts in time and space: The evolutionary history of Triturus newts at different temporal and spatial scales

This thesis was financially supported by a Fundação para a Ciência e para a Tecnologia (FCT) PhD grant (ref. SFRH/BD/16894/2004)

Thesis, Leiden University

Cover illustration: © Nick Poyarkov

Photo credits (introduction): Figs. 2, 4 - Piet Spaans; Fig. 3 - Christian Herzog; Fig. 7 - Clara Cartier; Licensed under a Creative Commons Attribution ShareAlike 2.5 License

(http://creativecommons.org/licenses/by-sa/2.5/) Fig. 5 - Ben Wielstra; Fig. 8 - Ricardo Pereira.

© All rights reserved. Reproduced with permission.

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Newts in time and space:

The evolutionary history of Triturus newts at different temporal and spatial

scales

Proefschrift ter verkrijging van

de graad van Doctor aan de Universiteit Leiden,

op gezag van de Rector Magnificus Prof. Mr. P. F. van der Heijden, volgens besluit van het College voor Promoties

te verdedigen op woensdag 10 maart klokke 16:15 uur

door

Gonçalo Espregueira Themudo

geboren te Vila Nova de Gaia, Portugal, in 1979

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Promotiecomissie

Promotor: Prof. Dr. E. Gittenberger (Universiteit Leiden)

Co-promotor: Dr. J. W. Arntzen (Nationaal Natuurhistorisch Museum Naturalis, Leiden)

Referent: Prof. Dr. S. B. J. Menken (IBED, Universiteit van Amsterdam)

Overige leden: Prof. Dr. P.M. Brakefield (Universiteit Leiden

Prof. Dr. C.J. ten Cate (Universiteit Leiden) Dr. J. A. Godoy (Estación Biológica Doñana,

CSIC, Sevilla, Spain)

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Aos meus pais

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Contents

Nederlands samenvatting

CHAPTER 1 Introduction and Summary 1

CHAPTER 2 The phylogeny of crested newts (Triturus cristatus 17 superspecies): nuclear and mitochondrial genetic

characters suggest a hard polytomy, in line with the paleogeography of the centre of origin.

Arntzen, J.W., B. Wielstra & G. Espregueira Themudo

CHAPTER 3 A combination of techniques proves useful for the 45 development of nuclear genes for

the newt genus Triturus

Espregueira Themudo, G., W. Babik & J. W. Arntzen

CHAPTER 4 Multiple nuclear and mitochondrial genes 55 resolve the branching order of a rapid

radiation of crested newts (Triturus, Salamandridae) Espregueira Themudo, G., B. Wielstra & J. W. Arntzen

CHAPTER 5 Newts in space: Geography helps in the distinction 79 between gene flow and incomplete lineage sorting

Espregueira Themudo, G., A. Bickham-Baird & J.W. Arntzen

CHAPTER 6 Current gene flow across a newt hybrid zone follows 95 local ecological conditions

Espregueira Themudo, G. & J. W. Arntzen

CHAPTER 7 Environmental parameters that determine species 121 geographical range limits as a

matter of time and space.

Arntzen, J. W. & G. Espregueira Themudo

CHAPTER 8 Molecular identification of marbled newts and 137 a justification of species status for

Triturus marmoratus and T. pygmaeus Espregueira Themudo, G. & J. W. Arntzen

CHAPTER 9 Newts under siege: range expansion of 157 Triturus pygmaeus isolates populations of its sister species

Espregueira Themudo, G. & J. W. Arntzen

Acknowledgments 177

Curriculum Vitae 178

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License: Licence agreement concerning inclusion of doctoral thesis in the Institutional Repository of the University of Leiden. Downloaded

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