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Cover Page The following handle holds various files of this Leiden University dissertation: http://hdl.handle.net/1887/80841

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The following handle holds various files of this Leiden University dissertation: http://hdl.handle.net/1887/80841

Author: Shao, S.

Title: Involvement of host and bacterial factors in Agrobacterium-mediated

transformation

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Involvement of host and bacterial factors in

Agrobacterium-mediated transformation

Shuai Shao

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Shuai Shao

Involvement of host and bacterial factors in Agrobacterium-mediated transformation PhD thesis, Leiden University, The Netherlands, 2019

Shuai Shao was supported by a grant from the China Scholarship Council (No. 201406740044). ISBN: 978-94-6375-648-8

Printed by Ridderprint, The Netherlands

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Involvement of host and bacterial factors in

Agrobacterium-mediated transformation

Proefschrift

Ter verkrijging van

de graad van Doctor aan de Universiteit Leiden, op gezag van Rector Magnificus prof. mr. C.J.J.M. Stolker,

volgens besluit van het College voor Promoties te verdedigen op donderdag 28 November 2019

klokke 11:15 uur

door

Shuai Shao

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Promotor

Prof. Dr. P.J.J. Hooykaas

Co-promotor

Dr. G.P.H. van Heusden

Promotiecommissie

Prof. Dr. G.P. van Wezel Prof. Dr. J. Memelink Prof. Dr. R. Offringa

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Table of contents

Chapter 1 9

General introduction

Chapter 2 29

Analysis of the function of ADA2 in double strand break repair and Agrobacterium-mediated transformation of Saccharomyces cerevisiae

Chapter 3 63

Detection of extrachromosomal circular T-DNA formed during Agrobacterium-mediated transformation

Chapter 4 77

Use of the Auxin-induced degron system to study the role of virulence protein VirD2 in the integration of T-DNA into the plant and yeast genome

Chapter 5 95

Complete sequence of the tumor-inducing plasmid pTiChry5 from the hypervirulent

Agrobacterium tumefaciens strain Chry5

Chapter 6 111

Complete sequence of succinamopine Ti-plasmid pTiEU6 reveals its evolutionary relatedness with nopaline-type Ti-plasmids

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