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University of Groningen Development of genetic manipulation tools in Macrostomum lignano for dissection of molecular mechanisms of regeneration Wudarski, Jakub

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University of Groningen

Development of genetic manipulation tools in Macrostomum lignano for dissection of

molecular mechanisms of regeneration

Wudarski, Jakub

IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below.

Document Version

Publisher's PDF, also known as Version of record

Publication date: 2019

Link to publication in University of Groningen/UMCG research database

Citation for published version (APA):

Wudarski, J. (2019). Development of genetic manipulation tools in Macrostomum lignano for dissection of molecular mechanisms of regeneration. Rijksuniversiteit Groningen.

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Development of genetic

manipulation tools in

Macrostomum lignano for dissection

of molecular mechanisms of

regeneration

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ISBN (printed version): 978-94-034-1318-1

ISBN (electronic version): 978-94-034-1317-4

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Development of genetic manipulation

tools in Macrostomum lignano for

dissection of molecular mechanisms of

regeneration

PhD thesis

to obtain the degree of PhD at the University of Groningen

on the authority of the Rector Magnificus Prof. E. Sterken

and in accordance with the decision by the College of Deans. This thesis will be defended in public on Monday 14 January 2019 at 12.45 hours

by

Jakub Wudarski

born on 8 January 1986

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Supervisor

Prof. E. Berezikov

Co-supervisor

Prof. V. Guryev

Assessment Committee

Prof. E.A.A. Nollen Prof. F.M. Reggiori Prof. M. Tijsterman

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To my family

Mojej Rodzince

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CONTENTS

CHAPTER

1

9

General introduction and the outline of the thesis

CHAPTER

2

15

The regenerative flatworm Macrostomum lignano, a model organism with

high experimental potential

CHAPTER

3

33

Efficient transgenesis and annotated genome sequence of the regenerative flatworm model Macrostomum lignano

CHAPTER

4

71

Proof of principle for transposon-mediated transgenesis in

Macrostomum lignano

CHAPTER

5

85

Influence of temperature on the development, reproduction and regeneration in the flatworm model organism Macrostomum lignano

CHAPTER

6

103

Flourescentce activated cell sorting is an efficient approach for establishing transcriptional profiles of various tissues in the flatworm

Macrostomum lignano

CHAPTER

7

127

Summary and Discussion Future perspectives

APPENDICES

133

Nederlandse Samenvatting Acknowledgements CV List of Publications

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