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Nucleosome dynamics resolved with single-pair fluorescence resonance energy transfer spectroscopy Koopmans, W.J.A.

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Nucleosome dynamics resolved with single-pair

fluorescence resonance energy transfer spectroscopy

Koopmans, W.J.A.

Citation

Koopmans, W. J. A. (2009, June 18). Nucleosome dynamics resolved with single-pair fluorescence resonance energy transfer spectroscopy. Retrieved from https://hdl.handle.net/1887/13856

Version: Corrected Publisher’s Version

License: Licence agreement concerning inclusion of doctoral thesis in the Institutional Repository of the University of Leiden

Downloaded from: https://hdl.handle.net/1887/13856

Note: To cite this publication please use the final published version (if

applicable).

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List of Publications

1. D. Stein, F. H. J. van der Heyden, W. J. A. Koopmans, and C. Dekker, Pressure-driven transport of confined DNA polymers in fluidic channels. Proceedings of the National Academy of Sciences of the USA103, 15853-15858 (2006)

2. W. J. A. Koopmans, A. Brehm, C. Logie, T. Schmidt, and J. van Noort, Single-pair FRET microscopy reveals mononucleosome dynamics. Journal of Fluorescence17, 785-795 (2007) 3. W. J. A. Koopmans, T. Schmidt, and J. van Noort, Nucleosome immobilization strategies

for single-pair FRET microscopy. ChemPhysChem9, 2002-2008 (2008)

4. W. J. A. Koopmans, R. Buning, T. Schmidt, and J. van Noort, spFRET using alternating excitation and FCS reveals progressive DNA unwrapping in nucleosomes. Biophysical Journal97, (2009)

5. W. J. A. Koopmans, R. Buning, J. van Noort, Engineering mononucleosomes for single- pair FRET experiments. to appear as a chapter in Methods in Molecular Biology: Proto- cols in DNA Nanotechnology (ed. G. Zuccheri & B. Samori), Humana Press (2009) 6. M. J. M. Schaaf, W. J. A. Koopmans, T. Meckel, J. van Noort, E. Snaar-Jagalska, T. Schmidt

and H. P. Spaink, Single-molecule microscopy in living zebrafish embryos. Biophysical Journal (2009), accepted for publication

7. D. Stein, Z. Deurvorst, F. H. J. van der Heyden, W. J. A. Koopmans, and C. Dekker, Electrokinetic DNA concentration in nanofluidic channels. under revision

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